The Effective Role of Soil Indigenous Fungi on 2.4-D Herbicide Degradation
Abstract
The normal field soil environment safeguarded, via indigenous microbes in a native manner, with the aim of turning herbicide waste into productive bio-resources, through fungi activities. This study aims to determine the effective role of soil indigenous fungi on 2.4-D herbicide degradation. The research was conducted over a period of six weeks, on Iraqi cereal field. A total of eight fungi species, belonging to six genera, (Aspergillus candidus L. ATCC 1002, A. niger T. ATCC 16888, Curvularia lunata W. B1933, Penicillium sp. L. 1809, Rhizopus stolonifer L. B9770, Stachybotrys atra C. 1837, Trichoderma harzianum R. IOC 3844, and T. lignorum T. Hartz 1872), were isolated from the soil. During the exposure periods, fungal populations were differently affected, upon treatments with herbicide. The applied herbicide treatments showed different effects on growth and development of the isolated fungi. The results showed that, five of the eight fungi species (C. lunata B1933, Penicillium sp. 1809, R. stolonifer B9770, T. harzianum IOC 3844, and T. lignorum Hartz 1872) were greatly enhanced by the treatment process. However, two fungi (S. atra 1837, and A. candidus ATCC 1002) were affected negatively by the herbicide, while one (A. niger ATCC 16888) remained unaffected. Once extracted from the soil of wheat fields in Iraq, the fungus S. atra 1837, was first isolated. The highest inhibitory effect was caused by 2.4-D herbicide, on the toxigenic fungus S. atra, causing its disappearance from the field at the last week of application. The laboratory experiments showed similar herbicide effects on the isolated fungi at low and moderate levels, while those at the high level (800 µg/ml) were toxic. These results showed that the herbicide 2.4-D treatments have substantial effects on microbial population in the field. When applied at recommended field rate, the herbicide causes transient impacts on fungal population growth and biodiversity, with the majority of the organism becoming responsible for 2.4-D mineralization in the soil. Therefore, the use of 2.4-D herbicide does not only control weed population, but it also affects microbial activities, especially indigenous fungi in the soil.
References
Adomako MO, Akyeampong S. 2016. Effect of some commonly used herbicides on soil microbial population. Journal of Environment and Earth Science. vol 6(1): 30–38.
Banks ML, Kennedy AC, Kremer RJ, Eivazi F. 2014. Soil microbial community response to surfactants and herbicides in two soils. Applied Soil Ecology. vol 74: 12–20. doi: https://doi.org/10.1016/j.apsoil.2013.08.018.
Bernat P, Nykiel-Szymańska J, Stolarek P, Słaba M, Szewczyk R, Różalska S. 2018. 2.4-dichlorophenoxyacetic acid-induced oxidative stress: Metabolome and membrane modifications in Umbelopsis isabellina, a herbicide degrader. Plos One. vol 13(6): 1–18. doi: doi.org/10.1371/journal.pone.0199677.
Botero LR, Mougin C, Peñuela G, Barriuso E. 2017. Formation of 2,4-D bound residues in soils: New insights into microbial metabolism. Science of the Total Environment. vol 584: 715–722. doi: https://doi.org/10.1016/j.scitotenv.2017.01.105.
Ceballos R, Quiroz A, Palma G. 2011. Effects of post-emergence herbicides on in vitro growth of Fusarium oxysporum isolated from clover root rot. Journal of Soil Science and Plant Nutrition. vol. 11 (2): 1–7. doi: https://doi.org/10.4067/S0718-95162011000200001.
Diez MC. 2010. Biological aspects involved in the degradation of organic pollutants. Journal of Soil Science and Plant Nutrition. vol 10(3): 244–267. doi: https://doi.org/ 10.4067/S0718-95162010000100004.
Escamilla D, Rosso ML, Zhang B. 2019. Identification of fungi associated with soybeans and effective seed disinfection treatments. Food Science and Nutrition. vol 7(10): 3194–3205. doi: https://doi.org/10.1002/fsn3.1166.
Fernando WD, Li R. 2012. Opening the black box: understanding the influence of cropping systems and plant communities on bacterial and fungal population dynamics. Ceylon Journal of Science (Biological Sciences). vol 41(2): 89–110. doi: http://dx.doi.org/10.4038/cjsbs.v41i2.5380.
Fang G, Si Y, Tian C, Zhang G, Zhou D. 2012. Degradation of 2, 4-D in soils by Fe3O4 nanoparticles combined with stimulating indigenous microbes. Environmental Science and Pollution Research. vol 19(3): 784–793. doi: https://doi.org/10.1007/s11356-011-0597-y.
Ferreira-Guedes S, Mendes B, Leitão AL. 2012. Degradation of 2, 4-dichlorophenoxyacetic acid by a halotolerant strain of Penicillium chrysogenum: antibiotic production. Environmental Technology. vol 33(6): 677–686. doi: https://doi.org/10.1080/09593330.2011.588251.
Goswami M, Chakraborty P, Mukherjee K, Mitra G, Bhattacharyya P, Dey S, Tribedi P. 2018. Bioaugmentation and biostimulation: a potential strategy for environmental remediation. Journal of Microbiology and Experimentation. vol 6(5): 223–231. doi: https://doi.org/10.15406/jmen.2018.06.00219.
Harding DP, Raizada MN. 2015. Controlling weeds with fungi, bacteria and viruses: a review. Frontiers in Plant Science. vol 6: 1–14. doi: https://doi.org/10.3389/fpls.2015.00659.
Ju Z, Liu SS, Xu YQ, Li K. 2019. Combined toxicity of 2, 4-dichlorophenoxyacetic acid and its metabolites 2, 4-dichlorophenol (2, 4-DCP) on two nontarget organisms. ACS Omega. vol 4(1): 1669–1677. doi: https://doi.org/10.1021/acsomega.8b02282.
Kumar A, Trefault N, Olaniran AO. 2016. Microbial degradation of 2, 4-dichlorophenoxyacetic acid: insight into the enzymes and catabolic genes involved, their regulation and biotechnological implications. Critical Reviews in Microbiology. vol 42(2): 194–208. doi: https://doi.org/10.3109/1040841X.2014.917068.
Kumar BL, Sai Gopal DVR. 2015. Effective role of indigenous microorganisms for sustainable environment. 3 Biotech. vol 5(6): 867–876. doi: https://doi.org/10.1007/s13205-015-0293-6.
Nikolaivits E, Agrafiotis A, Termentzi A, Machera K, Le Goff G, Álvarez P, Chavanich S,Benayahu Y,
Ouazzani J, Fokialakis N, Topakas E. 2019. Unraveling the detoxification mechanism of 2, 4-dichlorophenol by marine-derived mesophotic symbiotic fungi isolated from marine invertebrates. Marine Drugs. vol 17(10): 1–11. doi: https://doi.org/10.3390/md17100564.
Nykiel-Szymańska J, Stolarek P, Bernat P. 2018. Elimination and detoxification of 2, 4-D by Umbelopsis isabellina with the involvement of cytochrome P450. Environmental Science and Pollution Research. vol 25(3): 2738–2743. doi: https://doi.org/10.1007/s11356-017-0571-4.
Rhodes CJ. 2014. Mycoremediation (bioremediation with fungi)–growing mushrooms to clean the earth. Chemical Speciation & Bioavailability. vol 26(3): 196–1198. doi: https://doi.org/.10.3184/095422914X14047407349335.
Ross DJ. 1992. Influence of sieve mesh size on estimates of microbial carbon and nitrogen by fumigation-extraction procedures in soils under pasture. Soil Biology and Biochemistry. vol 24(4): 343–350. doi: https://doi.org/10.1016/0038-0717(92)90194-3.
Serbent MP, Rebelo AM, Pinheiro A, Giongo A, Tavares LBB. 2019. Biological agents for 2, 4-dichlorophenoxyacetic acid herbicide degradation. Applied Microbiology and Biotechnology. vol 103(13): 5065–5078. doi: https://doi.org/10.1007/s00253-019-09838-4.
Spina F, Cecchi G, Landinez TA, Pecoraro L, Russo F, Wu B. 2018. Fungi as a toolbox for sustainable bioremediation of pesticides in soil and water. Plant Biosystems. vol 152 (3): 474–488. doi: https://doi.org/10.1080/11263504.2018.1445130.
Tétard‐Jones C, Edwards R. 2016. Potential roles for microbial endophytes in herbicide tolerance in plants. Pest Management Science. vol 72(2): 203–209. doi: https://doi.org/10.1002/ps.4147.
Treu R, Falandysz J. 2017. Mycoremediation of hydrocarbons with basidiomycetes–a review. Journal of Environmental Science and Health, Part B. vol 52(3): 148–155. doi: https://doi.org/10.1080/03601234.2017.1261536.
Urík M, Boriová K, Bujdoš M, Matúš P. 2016. Fungal selenium (VI) accumulation and biotransformation–filamentous fungi in selenate contaminated aqueous media remediation. CLEAN–Soil, Air, Water. vol 44(6): 610–614. doi: https://doi.org/10.1002/clen.201500100.
van de Voorde TF, van der Putten WH, Bezemer TM. 2012. Soil inoculation method determines the strength of plant–soil interactions. Soil Biology and Biochemistry. vol 55: 1–6. doi: https://doi.org/10.1016/j.soilbio.2012.05.020.
Xia ZY, Zhang L, Zhao Y, Yan X, Li SP, Gu T, Jiang JD. 2017. Biodegradation of the herbicide 2.4- dichlorophenoxyacetic acid by a new isolated strain of Achromobacter sp. LZ35. Current Microbiology. vol 74(2): 193–202. doi: https://doi.org/10.1007/s00284-016-1173-y.
Zain NMM, Mohamad RB, Sijam K, Morshed MM, Awang Y. 2013. Effects of selected herbicides on soil microbial populations in oil palm plantation of Malaysia: A microcosm experiment. African Journal of Microbiology Research. vol 7(5): 367–374. doi: https://doi.org/10.5897/AJMR12.1277.
Zhang C, Liu X, Dong F, Xu J, Zheng Y, Li J. 2010. Soil microbial communities response to herbicide 2, 4-dichlorophenoxyacetic acid butyl ester. European Journal of Soil Biology. vol 46(2): 175–180. doi: https://doi.org/10.1016/j.ejsobi.2009.12.005.
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